CDS
| Accession Number | TCMCG007C24521 |
| gbkey | CDS |
| Protein Id | XP_009138312.1 |
| Location | join(31245989..31246183,31246276..31246318,31246406..31246495,31246573..31246648,31246758..31246827,31246926..31247075,31247152..31247256,31247337..31247483,31247607..31247682,31247796..31247884,31247973..31248064,31248196..31248238,31248345..31248422) |
| Gene | LOC103862364 |
| GeneID | 103862364 |
| Organism | Brassica rapa |
Protein
| Length | 417aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009140064.3 |
| Definition | squalene synthase 1 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | I |
| Description | squalene |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00702
[VIEW IN KEGG] R02872 [VIEW IN KEGG] R06223 [VIEW IN KEGG] |
| KEGG_rclass |
RC00362
[VIEW IN KEGG] RC00796 [VIEW IN KEGG] RC02839 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01006 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00801
[VIEW IN KEGG] |
| EC |
2.5.1.21
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00100
[VIEW IN KEGG] ko00909 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] ko01130 [VIEW IN KEGG] map00100 [VIEW IN KEGG] map00909 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] map01130 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGAGCTTGGGGACGTTTCTGAGATACCCTGATGATATATATCCGCTGCTGAAGATGAAACGAGCGATCGAGAAAGCAGAGAAGCAGATCCCACCTGAGCCACACTGGGCTTTCTGCTACTCAATGCTCCACAAGGTCTCTCGAAGCTTCTCTCTCGTTATTCAGCAGCTAGGCACCGAGCTTCGTAACGCTGTGTGTGTGTTCTACTTGGTTCTTCGAGCTCTTGATACTGTTGAGGATGACACTAGCATACCAACTGATGAGAAGCTGCCTATCCTGATAGCATTCCACCGGCACATATACGATACTGACTGGCACTATTCATGTGGTACCAAGGAATACAAGGTTCTGATGGACCAGCTTCACCATGTTTCTGCAGCTTTTTTGGAACTTGAAAAAGGGTATCAAGAGGCTATTGAGGAAATTACTAAAAGAATGGGTGCAGGAATGGCCAAGTTTATCTGCCATGAGGTAGAGACTGTTGATGACTATGATGAGTACTGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTCTCTAAACTCTTCCTCGCTTCCGGATCAGAAGTTTTGACCCCAGACTGGGAGCATATTTCCAATTCAATGGGTTTATTTCTTCAGAAAACAAACATAATCAGAGACTATCTTGAGGACATTAATGAAATACCAAAGTCCCGCATGTTTTGGCCTCGCAAGATCTGGGGCAAATATGCTGGCAAGCTCGAGGACTTGAAATACGAGAAGAACTCAAGCAATGCAGTGCAGTGCTTGAATGAAATGGTCACCAATGCTTTGACGCATATTGAAGATTGCCTCAAATACATGGCTGCCTTGCGTGATCCTTCTATTTTTCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGTACACTTGCGTTATGCTATAACAATGTGCAAGTATTTAGAGGCGTTGTGAAATTGAGGCGAGGTCTTACTGCTAAAGTGATTGATCGGACAAAGACAATGGCTGATGTGTATGGTGCCTTTTATGATTTTTCTTGCATGCTGAAAACAAAGGTTGACAAGAACGAGCCAAATGCTAGTAAGACACTAAAACAACTAGAAGACGTTCAGCAACTATGCAGAGACAACGGGGTTCTTCATAAGAGAAAGTCTTATGTTAATGACAAAGGACAATCAAACAATCTTTATATTGTAATGCTTGTGATTCTACTGGCCATAGTCTTTGCATATCTCAGAGCAAACGGAGTGGTCAGTGATGAGCAGTGA |
| Protein: MGSLGTFLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWAFCYSMLHKVSRSFSLVIQQLGTELRNAVCVFYLVLRALDTVEDDTSIPTDEKLPILIAFHRHIYDTDWHYSCGTKEYKVLMDQLHHVSAAFLELEKGYQEAIEEITKRMGAGMAKFICHEVETVDDYDEYCHYVAGLVGLGLSKLFLASGSEVLTPDWEHISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRKIWGKYAGKLEDLKYEKNSSNAVQCLNEMVTNALTHIEDCLKYMAALRDPSIFRFCAIPQIMAIGTLALCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNEPNASKTLKQLEDVQQLCRDNGVLHKRKSYVNDKGQSNNLYIVMLVILLAIVFAYLRANGVVSDEQ |